BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022E12LP1|AL427921
(990 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1681 1346 0.0
3x_Contig1011 236 6e-62
>3x_Contig1681
Length = 11798
Score = 1346 bits (678), Expect = 0.0
Identities = 714/726 (98%), Gaps = 1/726 (0%)
Strand = Plus / Plus
Query: 1 gcaaatggcaccaaaaccatgaaaaagtagtaatcacgtggtatccgcgtgactgtgaat 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 11073 gcaaatggcaccaaaaccatgaaaaagttgtaatcacgtggtatccgcgtgactgtgaat 11132
Query: 61 tttttccaaatttttcgccgccggstanttgaaaacgtgtgcccctccaatggaggggat 120
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 11133 tttttccaaatttttcgccgccggcgtattgaaaacgtgtgcccctccaatggaggggat 11192
Query: 121 gggaagggaaaccagggactaattacggcagcccctccgaaaaaatcggagattggctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11193 gggaagggaaaccagggactaattacggcagcccctccgaaaaaatcggagattggctgg 11252
Query: 181 atatcgttgctgttcctaacaaaattcacttttttgcacatattattttttttgagcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11253 atatcgttgctgttcctaacaaaattcacttttttgcacatattattttttttgagcacc 11312
Query: 241 accgaggtacttgtgacatatttttggcacagaagaggcgtta-cagccttatgatctct 299
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 11313 accgaggtacttgtgacatatttttggcacagaagaggcgttagcagccttatgatctct 11372
Query: 300 gtaaaaccggtctctgtgaagcattgtgtttttaagctgtatatgcctatggaaaaacca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11373 gtaaaaccggtctctgtgaagcattgtgtttttaagctgtatatgcctatggaaaaacca 11432
Query: 360 tcacagtttatcgggatatcgaaagatatcgcaagaacagagaggggttatgagagagtt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11433 tcacagtttatcgggatatcgaaagatatcgcaagaacagagaggggttatgagagagtt 11492
Query: 420 ttgagctatccgattgattccctttacattggactgtttggatggctcagtagaattacg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11493 ttgagctatccgattgattccctttacattggactgtttggatggctcagtagaattacg 11552
Query: 480 tggtgattaagacttattatgggattgtagatagtggtaatggtaacaacaaaaaaaacc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11553 tggtgattaagacttattatgggattgtagatagtggtaatggtaacaacaaaaaaaacc 11612
Query: 540 tggaactttatgcgtactgcaggagtcacactgtctcagtataccaatggagttaatcat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11613 tggaactttatgcgtactgcaggagtcacactgtctcagtataccaatggagttaatcat 11672
Query: 600 tccttatttgccataggcacttttgtgtgaatgttttcaagtatgttgtcaagtttggtt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 11673 tccttatttgccataggcacttttgtgtgaatgttttcaagtatgttgtcaagggggggg 11732
Query: 660 aaagtacgtggaacaacgagaaacgaggggcggggagaatttgaaagttgttttactcat 719
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 11733 aaagtacgtggaacaacgagaaacgaggggcggngagaatttgaaagttgttttactcat 11792
Query: 720 tagtgg 725
||||||
Sbjct: 11793 tagtgg 11798
>3x_Contig1011
Length = 3580
Score = 236 bits (119), Expect = 6e-62
Identities = 127/129 (98%), Gaps = 1/129 (0%)
Strand = Plus / Minus
Query: 863 ttttctgtcacgagttctgcttactgttacattaatatacgtctacttcttctccttctc 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3580 ttttctgtcacgagttctgcttactgttacattaatatacgtctacttcttctccttctc 3521
Query: 923 cttcttcttctgtaaaaggttttctgataataaaacgattatmc-taagtttcggtttgt 981
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 3520 cttcttcttctgtaaaaggttttctgataataaaacgattatacttaagtttcggtttgt 3461
Query: 982 ggtgcgtgt 990
|||||||||
Sbjct: 3460 ggtgcgtgt 3452
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8116
Number of Sequences: 1807
Number of extensions: 8116
Number of successful extensions: 153
Number of sequences better than 1.0e-20: 2
length of query: 990
length of database: 10,358,551
effective HSP length: 16
effective length of query: 974
effective length of database: 10,329,639
effective search space: 10061068386
effective search space used: 10061068386
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)